Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_440044Uncharacterized protein. (128 aa)    
Predicted Functional Partners:
MPLA_290028
NifU_N domain-containing protein.
  
     0.714
MPLA_1620062
Uncharacterized protein.
  
     0.707
MPLA_160074
Uncharacterized protein.
  
     0.706
MPLA_30121
Uncharacterized protein.
  
     0.701
regB
Sensor histidine kinase RegB.
  
     0.670
MPLA_640008
Uncharacterized protein.
  
     0.661
MPLA_550005
Uncharacterized protein.
  
     0.651
MPLA_1220039
Uncharacterized protein.
  
     0.647
MPLA_1690010
GcrA cell cycle regulator.
  
     0.615
MPLA_720037
Uncharacterized protein.
  
     0.613
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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