Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MPLA_460001Family 3 extracellular solute-binding protein. (265 aa)    
Predicted Functional Partners:
MPLA_460002
Polar amino acid ABC transporter, inner membrane subunit.
 
  0.993
glnQ
Glutamine transporter subunit ATP-binding component of ABC superfamily.
  
  0.856
glnP
Glutamine transporter subunit membrane component of ABC superfamily.
  
  0.799
artQ
Arginine transporter subunit membrane component of ABC superfamily.
 
  0.787
gltK
Glutamate and aspartate transporter subunit membrane component of ABC superfamily.
  
  0.787
MPLA_180040
Glutamine ABC transporter (Integral membrane protein).
  
  0.783
hisQ
Histidine/lysine/arginine/ornithine transporter subunit membrane component of ABC superfamily.
 
  0.782
MPLA_1830160
Polar amino acid ABC transporter, inner membrane subunit.
 
 
  0.780
yecS-3
Putative transporter subunit: permease component of ABC superfamily transporter.
  
  0.771
MPLA_680061
Putative amino acid ABC transporter, permease protein.
  
  0.770
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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