STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_460003Type 11 methyltransferase. (216 aa)    
Predicted Functional Partners:
MPLA_870003
AMP-dependent synthetase and ligase.
    
 0.870
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.718
MPLA_1180010
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.675
MPLA_1800219
FAD dependent oxidoreductase; Belongs to the GcvT family.
  
  
  0.666
MPLA_160087
Sarcosine oxidase, alpha subunit family; Belongs to the GcvT family.
     
  0.648
nodQ
Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
 
 0.647
MPLA_320055
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
  
  
  0.640
MPLA_460002
Polar amino acid ABC transporter, inner membrane subunit.
   
   0.613
MPLA_1180011
N-acetyltransferase domain-containing protein.
     
  0.600
pdhB
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.598
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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