STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exbBBiopolymer transport protein ExbB. (314 aa)    
Predicted Functional Partners:
exbD
Membrane spanning protein in TonB-ExbB-ExbD complex.
 
 0.999
MPLA_590004
Protein TolR.
 
 0.997
MPLA_530004
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 0.992
MPLA_590005
Uncharacterized protein.
  
 0.955
MPLA_320112
TonB family protein.
  
 0.954
MPLA_670082
Uncharacterized protein.
  
 
 0.776
MPLA_160046
TonB-dependent siderophore receptor.
 
 
 0.756
MPLA_320110
TonB-dependent heme/hemoglobin receptor family protein.
  
 
 0.730
pal
Peptidoglycan-associated protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
   
 0.684
cobN
Cobaltochelatase subunit CobN.
  
  
 0.650
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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