Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MPLA_140116 | MPLA_1870023 | MPLA_140116 | MPLA_1870023 | Uncharacterized protein. | Adenylate cyclase. | 0.982 |
MPLA_140116 | MPLA_720056 | MPLA_140116 | MPLA_720056 | Uncharacterized protein. | Putative sensor/response regulator hybrid protein. | 0.474 |
MPLA_140116 | fixK | MPLA_140116 | MPLA_830038 | Uncharacterized protein. | Nitrogen fixation regulation protein FixK. | 0.783 |
MPLA_140116 | rpoA | MPLA_140116 | MPLA_1830027 | Uncharacterized protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.551 |
MPLA_140116 | rpoB | MPLA_140116 | MPLA_1820011 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.528 |
MPLA_1870023 | MPLA_140116 | MPLA_1870023 | MPLA_140116 | Adenylate cyclase. | Uncharacterized protein. | 0.982 |
MPLA_1870023 | MPLA_720056 | MPLA_1870023 | MPLA_720056 | Adenylate cyclase. | Putative sensor/response regulator hybrid protein. | 0.957 |
MPLA_1870023 | MPLA_720057 | MPLA_1870023 | MPLA_720057 | Adenylate cyclase. | Histidine kinase. | 0.964 |
MPLA_1870023 | fixK | MPLA_1870023 | MPLA_830038 | Adenylate cyclase. | Nitrogen fixation regulation protein FixK. | 0.945 |
MPLA_1870023 | rpoA | MPLA_1870023 | MPLA_1830027 | Adenylate cyclase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.892 |
MPLA_1870023 | rpoB | MPLA_1870023 | MPLA_1820011 | Adenylate cyclase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.858 |
MPLA_1870023 | rpoZ | MPLA_1870023 | MPLA_1220012 | Adenylate cyclase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.840 |
MPLA_720056 | MPLA_140116 | MPLA_720056 | MPLA_140116 | Putative sensor/response regulator hybrid protein. | Uncharacterized protein. | 0.474 |
MPLA_720056 | MPLA_1870023 | MPLA_720056 | MPLA_1870023 | Putative sensor/response regulator hybrid protein. | Adenylate cyclase. | 0.957 |
MPLA_720056 | MPLA_720057 | MPLA_720056 | MPLA_720057 | Putative sensor/response regulator hybrid protein. | Histidine kinase. | 0.999 |
MPLA_720056 | fixK | MPLA_720056 | MPLA_830038 | Putative sensor/response regulator hybrid protein. | Nitrogen fixation regulation protein FixK. | 0.784 |
MPLA_720056 | gltB | MPLA_720056 | MPLA_140317 | Putative sensor/response regulator hybrid protein. | Glutamate synthase, large subunit. | 0.556 |
MPLA_720057 | MPLA_1870023 | MPLA_720057 | MPLA_1870023 | Histidine kinase. | Adenylate cyclase. | 0.964 |
MPLA_720057 | MPLA_720056 | MPLA_720057 | MPLA_720056 | Histidine kinase. | Putative sensor/response regulator hybrid protein. | 0.999 |
MPLA_720057 | fixK | MPLA_720057 | MPLA_830038 | Histidine kinase. | Nitrogen fixation regulation protein FixK. | 0.745 |
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