MPLA_860033 protein (Mesorhizobium sp. ORS3359)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MPLA_860033

Uncharacterized protein. (150 aa)

Predicted Functional Partners:

MPLA_860034

0.773

guaB

0.564

MPLA_860032

0.440

nadD

0.438

MPLA_1830082

0.428

Your Current Organism:

Mesorhizobium sp. ORS3359

NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPLA_1830082	MPLA_860033	MPLA_1830082	MPLA_860033	CinA domain-containing protein; Belongs to the CinA family.	Uncharacterized protein.	0.428
MPLA_1830082	nadD	MPLA_1830082	MPLA_570040	CinA domain-containing protein; Belongs to the CinA family.	Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	0.945
MPLA_860032	MPLA_860033	MPLA_860032	MPLA_860033	Aspartate and glycine-rich protein.	Uncharacterized protein.	0.440
MPLA_860032	MPLA_860034	MPLA_860032	MPLA_860034	Aspartate and glycine-rich protein.	Uncharacterized protein.	0.440
MPLA_860033	MPLA_1830082	MPLA_860033	MPLA_1830082	Uncharacterized protein.	CinA domain-containing protein; Belongs to the CinA family.	0.428
MPLA_860033	MPLA_860032	MPLA_860033	MPLA_860032	Uncharacterized protein.	Aspartate and glycine-rich protein.	0.440
MPLA_860033	MPLA_860034	MPLA_860033	MPLA_860034	Uncharacterized protein.	Uncharacterized protein.	0.773
MPLA_860033	guaB	MPLA_860033	MPLA_1540004	Uncharacterized protein.	Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.	0.564
MPLA_860033	nadD	MPLA_860033	MPLA_570040	Uncharacterized protein.	Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	0.438
MPLA_860034	MPLA_860032	MPLA_860034	MPLA_860032	Uncharacterized protein.	Aspartate and glycine-rich protein.	0.440
MPLA_860034	MPLA_860033	MPLA_860034	MPLA_860033	Uncharacterized protein.	Uncharacterized protein.	0.773
guaB	MPLA_860033	MPLA_1540004	MPLA_860033	Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.	Uncharacterized protein.	0.564
nadD	MPLA_1830082	MPLA_570040	MPLA_1830082	Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	CinA domain-containing protein; Belongs to the CinA family.	0.945
nadD	MPLA_860033	MPLA_570040	MPLA_860033	Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	Uncharacterized protein.	0.438