STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_90041LysR substrate-binding protein; Belongs to the LysR transcriptional regulatory family. (315 aa)    
Predicted Functional Partners:
MPLA_90043
Uncharacterized short-chain type dehydrogenase/reductase y4eK; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.650
MPLA_90042
Uncharacterized short-chain type dehydrogenase/reductase y4eL.
 
     0.649
MPLA_90039
5-oxoprolinase.
 
     0.595
MPLA_1850031
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.593
MPLA_90040
5-oxoprolinase.
 
     0.575
MPLA_1390150
HTH lysR-type domain-containing protein; Belongs to the LysR transcriptional regulatory family.
  
     0.568
MPLA_220035
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.555
MPLA_1770001
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.545
MPLA_770034
HTH lysR-type domain-containing protein; Belongs to the LysR transcriptional regulatory family.
  
     0.537
MPLA_770030
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.536
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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