STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bepABeta-barrel assembly-enhancing protease. (574 aa)    
Predicted Functional Partners:
dnaK
Chaperone protein DnaK.
  
 0.864
alaS
Alanine--tRNA ligase.
   
 0.851
GCA_000745485_01386
Hypothetical protein.
   
 0.840
dnaJ
Chaperone protein DnaJ.
   
 0.835
rpoA
DNA-directed RNA polymerase subunit alpha.
  
 0.828
GCA_000745485_03035
Hypothetical protein.
  
 
 0.811
mnmE
tRNA modification GTPase MnmE.
  
 0.778
GCA_000745485_01336
Putative GMC-type oxidoreductase.
    
 0.778
GCA_000745485_02313
Putative GMC-type oxidoreductase.
    
 0.778
GCA_000745485_02764
Putative GMC-type oxidoreductase.
    
 0.778
Your Current Organism:
Methanobacterium veterum
NCBI taxonomy Id: 408577
Other names: DSM 19849, M. veterum, Methanobacterium sp. MK4, Methanobacterium veterum Krivushin et al. 2010, VKM B-2440, strain MK4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.