STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nth_2Endonuclease III. (208 aa)    
Predicted Functional Partners:
exoA
Exodeoxyribonuclease.
 
 0.999
nfo_2
Putative endonuclease 4.
  
 
 0.874
GCA_000745485_02597
Hypothetical protein.
  
 
 0.797
GCA_000745485_02694
Hypothetical protein.
       0.759
cysE
Serine acetyltransferase.
       0.734
uvrC_2
UvrABC system protein C.
 
   
 0.707
tilS
tRNA(Ile)-lysidine synthase.
 
    0.697
infB_3
Translation initiation factor IF-2.
       0.656
aroA
3-phosphoshikimate 1-carboxyvinyltransferase.
       0.644
alkA
DNA-3-methyladenine glycosylase.
   
 
 0.619
Your Current Organism:
Methanobacterium veterum
NCBI taxonomy Id: 408577
Other names: DSM 19849, M. veterum, Methanobacterium sp. MK4, Methanobacterium veterum Krivushin et al. 2010, VKM B-2440, strain MK4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.