STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttrBTetrathionate reductase subunit B. (451 aa)    
Predicted Functional Partners:
ndhI_7
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
  
  
 0.989
ndhA
NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic.
 
  
 0.986
GCA_000745485_02784
Hypothetical protein.
 
    0.981
GCA_000745485_02786
Hypothetical protein.
  
    0.967
GCA_000745485_02785
Hypothetical protein.
  
    0.958
mrpD
Na(+)/H(+) antiporter subunit D.
 
   
 0.894
GCA_000745485_02783
Hypothetical protein.
       0.846
hycG_2
Formate hydrogenlyase subunit 7.
  
  
 0.823
hycE_2
Formate hydrogenlyase subunit 5.
     
 0.771
mnhC1
Na(+)/H(+) antiporter subunit C1.
 
     0.759
Your Current Organism:
Methanobacterium veterum
NCBI taxonomy Id: 408577
Other names: DSM 19849, M. veterum, Methanobacterium sp. MK4, Methanobacterium veterum Krivushin et al. 2010, VKM B-2440, strain MK4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.