Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dnaJ | dnaK | GCA_000745485_03079 | GCA_000745485_03080 | Chaperone protein DnaJ. | Chaperone protein DnaK. | 0.999 |
dnaJ | groL_1 | GCA_000745485_03079 | GCA_000745485_00641 | Chaperone protein DnaJ. | 60 kDa chaperonin. | 0.957 |
dnaJ | groL_2 | GCA_000745485_03079 | GCA_000745485_02333 | Chaperone protein DnaJ. | 60 kDa chaperonin. | 0.957 |
dnaJ | grpE | GCA_000745485_03079 | GCA_000745485_03081 | Chaperone protein DnaJ. | Protein GrpE. | 0.999 |
dnaJ | hspA_2 | GCA_000745485_03079 | GCA_000745485_02814 | Chaperone protein DnaJ. | Spore protein SP21. | 0.819 |
dnaJ | lon1 | GCA_000745485_03079 | GCA_000745485_00826 | Chaperone protein DnaJ. | Lon protease 1. | 0.670 |
dnaJ | lon2 | GCA_000745485_03079 | GCA_000745485_00490 | Chaperone protein DnaJ. | Lon protease 2. | 0.711 |
dnaJ | ruvB | GCA_000745485_03079 | GCA_000745485_00382 | Chaperone protein DnaJ. | Holliday junction ATP-dependent DNA helicase RuvB. | 0.674 |
dnaJ | uvrC_2 | GCA_000745485_03079 | GCA_000745485_02221 | Chaperone protein DnaJ. | UvrABC system protein C. | 0.519 |
dnaK | dnaJ | GCA_000745485_03080 | GCA_000745485_03079 | Chaperone protein DnaK. | Chaperone protein DnaJ. | 0.999 |
dnaK | groL_1 | GCA_000745485_03080 | GCA_000745485_00641 | Chaperone protein DnaK. | 60 kDa chaperonin. | 0.991 |
dnaK | groL_2 | GCA_000745485_03080 | GCA_000745485_02333 | Chaperone protein DnaK. | 60 kDa chaperonin. | 0.991 |
dnaK | grpE | GCA_000745485_03080 | GCA_000745485_03081 | Chaperone protein DnaK. | Protein GrpE. | 0.999 |
dnaK | hspA_2 | GCA_000745485_03080 | GCA_000745485_02814 | Chaperone protein DnaK. | Spore protein SP21. | 0.696 |
dnaK | lon1 | GCA_000745485_03080 | GCA_000745485_00826 | Chaperone protein DnaK. | Lon protease 1. | 0.695 |
dnaK | lon2 | GCA_000745485_03080 | GCA_000745485_00490 | Chaperone protein DnaK. | Lon protease 2. | 0.724 |
dnaK | ruvB | GCA_000745485_03080 | GCA_000745485_00382 | Chaperone protein DnaK. | Holliday junction ATP-dependent DNA helicase RuvB. | 0.715 |
dnaK | uvrC_2 | GCA_000745485_03080 | GCA_000745485_02221 | Chaperone protein DnaK. | UvrABC system protein C. | 0.607 |
groL_1 | dnaJ | GCA_000745485_00641 | GCA_000745485_03079 | 60 kDa chaperonin. | Chaperone protein DnaJ. | 0.957 |
groL_1 | dnaK | GCA_000745485_00641 | GCA_000745485_03080 | 60 kDa chaperonin. | Chaperone protein DnaK. | 0.991 |
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