STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI43498.1Hypothetical protein. (421 aa)    
Predicted Functional Partners:
SEI60359.1
Peptidyl-prolyl cis-trans isomerase SurA.
    
 
 0.480
SEI43489.1
Enoyl-[acyl-carrier-protein] reductase [NADH].
       0.476
SEI95136.1
Thiosulfate dehydrogenase [quinone] large subunit.
  
    0.449
SEI43477.1
MFS transporter, DHA3 family, multidrug efflux protein.
       0.435
SEI94200.1
Predicted amidohydrolase.
  
     0.429
SEI60343.1
Periplasmic chaperone for outer membrane proteins SurA.
    
 
 0.416
SEJ50451.1
Peptidyl-prolyl cis-trans isomerase D.
    
 
 0.416
SEI43506.1
Cytochrome c peroxidase.
       0.412
SEJ03676.1
AAA domain-containing protein.
  
     0.405
SEI43516.1
Por secretion system C-terminal sorting domain-containing protein.
       0.400
Your Current Organism:
Dyadobacter koreensis
NCBI taxonomy Id: 408657
Other names: D. koreensis, DSM 19938, Dyadobacter koreensis Baik et al. 2007, Dyadobacter sp. WPCB159, KCTC 12537, NBRC 101116, strain WPCB159
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.