Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI49468.1 | SEI53815.1 | SAMN04487995_0952 | SAMN04487995_1228 | Hypothetical protein. | Phosphoribosylanthranilate isomerase. | 0.640 |
SEI49468.1 | SEI59806.1 | SAMN04487995_0952 | SAMN04487995_1569 | Hypothetical protein. | Peptidase family M50. | 0.648 |
SEI49468.1 | SEI76011.1 | SAMN04487995_0952 | SAMN04487995_2068 | Hypothetical protein. | Heme exporter protein B. | 0.724 |
SEI49468.1 | SEI76075.1 | SAMN04487995_0952 | SAMN04487995_2071 | Hypothetical protein. | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | 0.652 |
SEI49468.1 | SEI78323.1 | SAMN04487995_0952 | SAMN04487995_2194 | Hypothetical protein. | Hypothetical protein. | 0.766 |
SEI49468.1 | SEI79039.1 | SAMN04487995_0952 | SAMN04487995_2230 | Hypothetical protein. | Hypothetical protein. | 0.651 |
SEI49468.1 | SEI79099.1 | SAMN04487995_0952 | SAMN04487995_2233 | Hypothetical protein. | Gas vesicle protein. | 0.740 |
SEI49468.1 | SEI97618.1 | SAMN04487995_0952 | SAMN04487995_2837 | Hypothetical protein. | Hypothetical protein. | 0.754 |
SEI49468.1 | SEJ57826.1 | SAMN04487995_0952 | SAMN04487995_5418 | Hypothetical protein. | Hypothetical protein. | 0.746 |
SEI49468.1 | SEJ67942.1 | SAMN04487995_0952 | SAMN04487995_5861 | Hypothetical protein. | YcxB-like protein. | 0.741 |
SEI53815.1 | SEI49468.1 | SAMN04487995_1228 | SAMN04487995_0952 | Phosphoribosylanthranilate isomerase. | Hypothetical protein. | 0.640 |
SEI53815.1 | SEI59806.1 | SAMN04487995_1228 | SAMN04487995_1569 | Phosphoribosylanthranilate isomerase. | Peptidase family M50. | 0.538 |
SEI53815.1 | SEI76011.1 | SAMN04487995_1228 | SAMN04487995_2068 | Phosphoribosylanthranilate isomerase. | Heme exporter protein B. | 0.621 |
SEI53815.1 | SEI76075.1 | SAMN04487995_1228 | SAMN04487995_2071 | Phosphoribosylanthranilate isomerase. | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | 0.505 |
SEI53815.1 | SEI78323.1 | SAMN04487995_1228 | SAMN04487995_2194 | Phosphoribosylanthranilate isomerase. | Hypothetical protein. | 0.760 |
SEI53815.1 | SEI79039.1 | SAMN04487995_1228 | SAMN04487995_2230 | Phosphoribosylanthranilate isomerase. | Hypothetical protein. | 0.765 |
SEI53815.1 | SEI79099.1 | SAMN04487995_1228 | SAMN04487995_2233 | Phosphoribosylanthranilate isomerase. | Gas vesicle protein. | 0.765 |
SEI53815.1 | SEI97618.1 | SAMN04487995_1228 | SAMN04487995_2837 | Phosphoribosylanthranilate isomerase. | Hypothetical protein. | 0.727 |
SEI53815.1 | SEJ57826.1 | SAMN04487995_1228 | SAMN04487995_5418 | Phosphoribosylanthranilate isomerase. | Hypothetical protein. | 0.769 |
SEI53815.1 | SEJ67942.1 | SAMN04487995_1228 | SAMN04487995_5861 | Phosphoribosylanthranilate isomerase. | YcxB-like protein. | 0.765 |
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