Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI49616.1 | SEJ01271.1 | SAMN04487995_0960 | SAMN04487995_3028 | Long-chain acyl-CoA synthetase. | Cytochrome P450. | 0.979 |
SEI49616.1 | SEJ10329.1 | SAMN04487995_0960 | SAMN04487995_3225 | Long-chain acyl-CoA synthetase. | PAP2 superfamily protein. | 0.601 |
SEI49616.1 | rplF | SAMN04487995_0960 | SAMN04487995_5607 | Long-chain acyl-CoA synthetase. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.986 |
SEI74991.1 | SEJ01271.1 | SAMN04487995_2013 | SAMN04487995_3028 | fatty-acyl-CoA synthase. | Cytochrome P450. | 0.979 |
SEI74991.1 | SEJ10329.1 | SAMN04487995_2013 | SAMN04487995_3225 | fatty-acyl-CoA synthase. | PAP2 superfamily protein. | 0.601 |
SEI74991.1 | rplF | SAMN04487995_2013 | SAMN04487995_5607 | fatty-acyl-CoA synthase. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.986 |
SEJ01271.1 | SEI49616.1 | SAMN04487995_3028 | SAMN04487995_0960 | Cytochrome P450. | Long-chain acyl-CoA synthetase. | 0.979 |
SEJ01271.1 | SEI74991.1 | SAMN04487995_3028 | SAMN04487995_2013 | Cytochrome P450. | fatty-acyl-CoA synthase. | 0.979 |
SEJ01271.1 | SEJ10329.1 | SAMN04487995_3028 | SAMN04487995_3225 | Cytochrome P450. | PAP2 superfamily protein. | 0.802 |
SEJ01271.1 | SEJ29948.1 | SAMN04487995_3028 | SAMN04487995_4058 | Cytochrome P450. | O-succinylbenzoic acid--CoA ligase. | 0.979 |
SEJ01271.1 | rplF | SAMN04487995_3028 | SAMN04487995_5607 | Cytochrome P450. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.992 |
SEJ10306.1 | SEJ10329.1 | SAMN04487995_3224 | SAMN04487995_3225 | 4-amino-4-deoxy-L-arabinose transferase. | PAP2 superfamily protein. | 0.688 |
SEJ10306.1 | SEJ10352.1 | SAMN04487995_3224 | SAMN04487995_3226 | 4-amino-4-deoxy-L-arabinose transferase. | Nicotinamidase-related amidase. | 0.652 |
SEJ10306.1 | SEJ10370.1 | SAMN04487995_3224 | SAMN04487995_3227 | 4-amino-4-deoxy-L-arabinose transferase. | Hypothetical protein. | 0.476 |
SEJ10329.1 | SEI49616.1 | SAMN04487995_3225 | SAMN04487995_0960 | PAP2 superfamily protein. | Long-chain acyl-CoA synthetase. | 0.601 |
SEJ10329.1 | SEI74991.1 | SAMN04487995_3225 | SAMN04487995_2013 | PAP2 superfamily protein. | fatty-acyl-CoA synthase. | 0.601 |
SEJ10329.1 | SEJ01271.1 | SAMN04487995_3225 | SAMN04487995_3028 | PAP2 superfamily protein. | Cytochrome P450. | 0.802 |
SEJ10329.1 | SEJ10306.1 | SAMN04487995_3225 | SAMN04487995_3224 | PAP2 superfamily protein. | 4-amino-4-deoxy-L-arabinose transferase. | 0.688 |
SEJ10329.1 | SEJ10352.1 | SAMN04487995_3225 | SAMN04487995_3226 | PAP2 superfamily protein. | Nicotinamidase-related amidase. | 0.773 |
SEJ10329.1 | SEJ10370.1 | SAMN04487995_3225 | SAMN04487995_3227 | PAP2 superfamily protein. | Hypothetical protein. | 0.556 |
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