STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ38558.1Glycosyl transferase family 2. (235 aa)    
Predicted Functional Partners:
SEJ38564.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.846
SEJ38585.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.828
SEI52021.1
Glycosyl transferase family 2.
  
     0.770
SEJ09585.1
Glycosyl transferase family 2.
  
     0.744
SEJ10406.1
Glycosyl transferase family 2.
  
     0.733
SEJ09598.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.673
SEI51994.1
D,D-heptose 1,7-bisphosphate phosphatase.
  
 0.583
SEI40525.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
  
 0.550
SEI94016.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
     
 0.531
SEJ10429.1
Hypothetical protein.
 
      0.505
Your Current Organism:
Dyadobacter koreensis
NCBI taxonomy Id: 408657
Other names: D. koreensis, DSM 19938, Dyadobacter koreensis Baik et al. 2007, Dyadobacter sp. WPCB159, KCTC 12537, NBRC 101116, strain WPCB159
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.