STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ63597.1Protein of unknown function. (211 aa)    
Predicted Functional Partners:
SEI51853.1
Protein of unknown function.
    
0.924
SEI54907.1
Protein of unknown function.
 
     0.752
SEJ14143.1
Predicted dehydrogenase.
 
     0.752
SEJ39215.1
Predicted dehydrogenase.
 
     0.736
SEI51412.1
Tat (twin-arginine translocation) pathway signal sequence.
  
     0.714
SEI52988.1
Predicted dehydrogenase.
 
     0.712
SEJ49868.1
Predicted dehydrogenase.
  
     0.681
SEI50020.1
Protein of unknown function.
  
     0.670
SEJ64913.1
Predicted dehydrogenase.
  
     0.668
SEI37336.1
Tat (twin-arginine translocation) pathway signal sequence.
  
     0.666
Your Current Organism:
Dyadobacter koreensis
NCBI taxonomy Id: 408657
Other names: D. koreensis, DSM 19938, Dyadobacter koreensis Baik et al. 2007, Dyadobacter sp. WPCB159, KCTC 12537, NBRC 101116, strain WPCB159
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.