STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104211671ABC transporter I family member 20. (328 aa)    
Predicted Functional Partners:
LOC104246373
ABC transporter I family member 19-like.
  
 
 
0.911
LOC104212228
Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X1.
      
 0.499
LOC104238492
General negative regulator of transcription subunit 3 isoform X1.
      
 0.499
LOC104248110
Protein ABCI7, chloroplastic.
      
 0.499
LOC104213466
ABC transporter I family member 1.
  
  
 0.498
LOC104231691
Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic; Belongs to the MlaE permease family.
      
 0.497
LOC104236175
ABC transporter I family member 17.
      
 0.497
LOC104246339
psbB mRNA maturation factor Mbb1, chloroplastic.
      
 0.497
LOC104225874
Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic.
      
 0.471
LOC104231739
Protein ABCI12, chloroplastic isoform X1.
      
 0.471
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.