STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104213873Kirola-like. (147 aa)    
Predicted Functional Partners:
LOC104246532
F-box/LRR-repeat protein 13-like.
  
     0.450
LOC104243336
BAHD acyltransferase At5g47980-like.
  
     0.437
LOC104236117
F-box protein At3g08750-like.
  
     0.436
LOC104245551
F-box/kelch-repeat protein At3g06240-like.
  
     0.433
LOC104248328
Uncharacterized protein LOC104248328.
  
     0.429
LOC104231045
Uncharacterized protein LOC104231045.
  
     0.428
LOC104229268
Vinorine synthase-like.
  
     0.417
LOC104219165
Uncharacterized protein LOC104219165.
  
     0.415
LOC104215904
Uncharacterized protein LOC104215904.
  
     0.412
LOC104249924
Putative F-box protein At2g02030.
  
     0.411
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.