STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104212381Probable purine permease 4. (399 aa)    
Predicted Functional Partners:
LOC104220141
Blue copper protein.
  
   
 0.571
LOC104239623
EPIDERMAL PATTERNING FACTOR-like protein 2.
  
     0.501
LOC104237587
Uncharacterized protein LOC104237587.
  
     0.499
LOC104225590
Uncharacterized protein LOC104225590 isoform X1.
  
     0.494
LOC104237027
GDSL esterase/lipase At4g16230-like.
  
     0.494
LOC104241952
Uncharacterized protein LOC104241952 isoform X1.
  
     0.486
LOC104235346
Putative E3 ubiquitin-protein ligase LIN isoform X1.
  
     0.481
LOC104235098
Oleosin 14.9 kDa-like.
  
     0.479
LOC104237289
Uncharacterized protein LOC104237289.
  
     0.473
LOC104227989
Uncharacterized protein LOC104227989.
  
     0.471
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.