STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104212540Uncharacterized protein LOC104212540. (264 aa)    
Predicted Functional Partners:
LOC104211127
Uncharacterized protein LOC104211127.
  
     0.476
LOC104213206
Uncharacterized protein LOC104213206.
  
     0.475
LOC104240320
Uncharacterized protein LOC104240320.
  
     0.475
LOC104246131
Uncharacterized protein LOC104246131.
  
     0.474
LOC104228500
Uncharacterized protein LOC104228500.
  
     0.473
LOC104212504
Uncharacterized protein LOC104212504.
  
     0.447
LOC104242843
Uncharacterized protein LOC104242843.
  
     0.447
LOC104228001
Uncharacterized protein LOC104228001.
  
     0.440
LOC104240970
Uncharacterized protein LOC104240970.
  
     0.434
LOC104226734
Uncharacterized protein LOC104226734.
  
     0.409
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.