STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104214162Dynamin-related protein 5A; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (609 aa)    
Predicted Functional Partners:
LOC104214057
Translation initiation factor IF-2, mitochondrial.
      
 0.819
LOC104238149
Translation initiation factor IF-2, chloroplastic.
      
 0.819
LOC104236208
endophilin-A3.
    
 
 0.514
LOC104242852
Uncharacterized protein LOC104242852 isoform X1.
   
 
 0.514
LOC104222593
Uncharacterized protein LOC104222593 isoform X1.
      
 0.499
LOC104211205
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.461
LOC104232338
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.461
LOC104234988
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.461
LOC104231043
AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family.
    
 0.456
LOC104238414
AP-2 complex subunit mu-like; Belongs to the adaptor complexes medium subunit family.
    
 0.456
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.