STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104212659Fasciclin-like arabinogalactan protein 11. (250 aa)    
Predicted Functional Partners:
LOC104227792
Serine/threonine-protein phosphatase.
    
 0.508
LOC104215683
Probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial.
    
 
 0.498
LOC104233403
Probable 3-hydroxyisobutyrate dehydrogenase-like 2, mitochondrial.
    
 
 0.498
LOC104224515
Kinesin-like calmodulin-binding protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.496
LOC104224530
lysM domain-containing GPI-anchored protein 1-like.
  
 
  0.481
LOC104227829
Uncharacterized protein LOC104227829.
  
     0.455
LOC104210184
Non-specific lipid-transfer protein 1-like; Belongs to the plant LTP family.
  
     0.444
LOC104216408
Gibberellin-regulated protein 12-like.
  
 
  0.439
LOC104242741
Early nodulin-93.
      
 0.439
LOC104227156
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
   
 0.436
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.