STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104214765Caffeoylshikimate esterase-like. (342 aa)    
Predicted Functional Partners:
LOC104219758
Triacylglycerol lipase SDP1-like.
   
 
 0.912
LOC104246754
LOW QUALITY PROTEIN: triacylglycerol lipase SDP1-like.
   
 
 0.912
LOC104211349
Glycerol kinase.
    
 0.903
LOC104224856
Aldose reductase isoform X1.
   
 
  0.901
LOC104238810
Aldo-keto reductase family 4 member C10-like.
   
 
  0.901
LOC104229239
(DL)-glycerol-3-phosphatase 2 isoform X1.
     
  0.900
LOC104211220
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial; Belongs to the complex I 75 kDa subunit family.
   
 
 0.751
ndhH
NAD(P)H-quinone oxidoreductase subunit H, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
   
 
 0.706
LOC104234990
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like.
   
 
 0.676
LOC104220819
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 
 0.675
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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