STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104211393Eukaryotic translation initiation factor 5A-2-like. (75 aa)    
Predicted Functional Partners:
LOC104231513
Deoxyhypusine synthase isoform X1.
   
 0.936
LOC104244315
60S ribosomal protein L39-3.
  
 
 0.924
LOC104233516
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.918
LOC104218989
60S ribosomal protein L5.
   
 
 0.913
LOC104224653
60S ribosomal protein L5-like.
   
 
 0.913
LOC104238344
60S ribosomal protein L11-1; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.901
LOC104245602
60S ribosomal protein L11-1-like; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.901
LOC104223004
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.900
LOC104243832
40S ribosomal protein S23-like; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.900
LOC104224664
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.
  
 0.899
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.