STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104213897Uncharacterized protein LOC104213897. (296 aa)    
Predicted Functional Partners:
LOC104230352
Uncharacterized protein LOC104230352.
  
     0.505
LOC104236098
Uncharacterized protein LOC104236098.
  
     0.496
LOC104242662
Uncharacterized protein LOC104242662.
  
     0.492
LOC104244941
Hepatoma-derived growth factor-related protein 2-like.
  
     0.486
LOC104227478
Uncharacterized protein LOC104227478.
  
     0.481
LOC104240298
Uncharacterized protein LOC104240298.
  
     0.468
LOC104222433
Myb-like protein X isoform X1.
  
     0.467
LOC104229102
Uncharacterized protein LOC104229102.
  
     0.467
LOC104223635
Uncharacterized protein LOC104223635.
  
     0.461
LOC104229044
Uncharacterized protein LOC104229044.
  
     0.459
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.