STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104211488Purple acid phosphatase. (538 aa)    
Predicted Functional Partners:
LOC104231076
Beta-hexosaminidase.
  
  
 0.566
LOC104223305
Beta-hexosaminidase.
  
  
 0.540
LOC104221276
Piezo-type mechanosensitive ion channel homolog isoform X1.
   
  
 0.506
LOC104237406
Beta-hexosaminidase.
  
  
 0.505
LOC104214942
Dynamin-related protein 1C; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.501
LOC104213128
Probable E3 ubiquitin-protein ligase BAH1-like.
      
 0.497
LOC104248323
Protein RALF-like 27.
      
 0.497
LOC104222616
SPX domain-containing protein 3.
     
 0.457
LOC104237074
Prolycopene isomerase, chloroplastic.
     
 0.410
LOC104231595
Nudix hydrolase 19, chloroplastic.
    
  0.403
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.