STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104211624Putative late blight resistance protein homolog R1B-23 isoform X1; Belongs to the disease resistance NB-LRR family. (921 aa)    
Predicted Functional Partners:
LOC104211244
RAN GTPase-activating protein 2.
   
   0.718
LOC104233517
Uncharacterized protein LOC104233517.
  
    0.474
LOC104212077
Uncharacterized protein LOC104212077.
  
     0.437
LOC104233678
UPF0481 protein At3g47200-like.
  
     0.423
LOC104236597
Uncharacterized protein LOC104236597.
  
 
   0.421
LOC104248530
Uncharacterized protein LOC104248530.
  
   0.407
LOC104211953
F-box/kelch-repeat protein At3g23880-like isoform X1.
  
     0.406
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.