STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104214248F-box protein At4g00755-like. (186 aa)    
Predicted Functional Partners:
LOC104214724
MACPF domain-containing protein CAD1-like.
  
 
  0.510
LOC104237625
MACPF domain-containing protein CAD1-like.
  
 
  0.501
LOC104211376
MACPF domain-containing protein CAD1.
  
 
  0.485
LOC104214261
Blue copper protein-like.
  
 
  0.454
LOC104228862
Probable methyltransferase PMT26.
  
 
  0.442
LOC104220753
NAC transcription factor 25.
  
 
   0.438
LOC104232586
Protein SHI RELATED SEQUENCE 5-like isoform X1.
  
     0.434
LOC104219364
Methyltransferase.
  
     0.430
LOC104241638
Methyltransferase.
  
     0.425
LOC104213692
Uncharacterized protein LOC104213692.
  
     0.423
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.