STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104211694Ornithine carbamoyltransferase, chloroplastic-like; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (376 aa)    
Predicted Functional Partners:
LOC104221286
Argininosuccinate synthase, chloroplastic.
  
 
 0.998
LOC104219972
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
   
 
 0.987
LOC104239278
Arginase 1, mitochondrial; Belongs to the arginase family.
   
 0.982
LOC104233662
Soluble starch synthase 3, chloroplastic/amyloplastic isoform X1.
  
 
 0.975
LOC104238401
Probable starch synthase 4, chloroplastic/amyloplastic isoform X1.
  
 
 0.975
LOC104224953
Aminoacylase-1.
    
 0.972
LOC104242920
Aminoacylase-1.
    
 0.972
LOC104236977
Acetylornithine deacetylase.
    
 0.971
LOC104240792
Carbamoyl-phosphate synthase small chain, chloroplastic.
   
 0.969
LOC104211166
Carbamoyl-phosphate synthase large chain, chloroplastic-like.
 
 
 0.967
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.