STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104215637Uncharacterized protein LOC104215637. (896 aa)    
Predicted Functional Partners:
LOC104239913
DNA-damage-repair/toleration protein DRT102.
  
 
 0.644
LOC104223689
Uncharacterized protein LOC104223689 isoform X1.
  
   
 0.518
LOC104210828
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
  
  0.507
LOC104223148
Uncharacterized protein LOC104223148 isoform X1.
  
  
  0.505
LOC104240925
Uncharacterized protein LOC104240925.
  
     0.501
LOC104230705
Uncharacterized protein LOC104230705 isoform X1.
  
     0.500
LOC104213904
Uncharacterized protein LOC104213904.
  
     0.490
LOC104217180
Uncharacterized protein LOC104217180 isoform X1.
  
     0.484
LOC104245709
Uncharacterized protein LOC104245709.
  
  
 0.482
LOC104229349
Uncharacterized protein LOC104229349 isoform X1.
  
     0.480
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.