STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104214558F-box protein SKIP14-like. (473 aa)    
Predicted Functional Partners:
LOC104223642
Uncharacterized protein LOC104223642 isoform X1.
  
 0.892
LOC104215376
Uncharacterized protein LOC104215376.
  
 0.764
LOC104219874
Triosephosphate isomerase, chloroplastic-like.
  
 0.764
LOC104224725
Triosephosphate isomerase, cytosolic-like.
  
 0.764
LOC104235952
Triosephosphate isomerase, chloroplastic-like.
  
 0.764
LOC104240174
Triosephosphate isomerase, cytosolic isoform X1.
  
 0.764
LOC104211749
Phosphoglycerate kinase, cytosolic-like.
  
 0.729
LOC104213842
Phosphoglycerate kinase, cytosolic-like.
  
 0.729
LOC104215547
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.729
LOC104227335
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.729
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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