STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104211936Mavicyanin-like isoform X1. (175 aa)    
Predicted Functional Partners:
LOC104245907
Uncharacterized protein LOC104245907.
      
 0.497
LOC104210228
Protein IQ-DOMAIN 14.
  
     0.456
LOC104249377
Transmembrane protein 185-like.
  
     0.444
LOC104219502
Uncharacterized protein LOC104219502 isoform X1.
  
     0.418
LOC104211519
Uncharacterized protein LOC104211519.
  
     0.407
LOC104240934
Protein CHUP1, chloroplastic-like.
  
     0.406
LOC104249024
Uncharacterized protein LOC104249024 isoform X1.
  
     0.406
LOC104234722
Uncharacterized protein LOC104234722.
  
     0.403
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.