STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104212384Probable glucan 1,3-beta-glucosidase A isoform X1; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (535 aa)    
Predicted Functional Partners:
LOC104226167
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.550
LOC104246758
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.550
LOC104248364
malonyl-CoA-acyl carrier protein transacylase, mitochondrial.
  
 
 0.496
LOC104216533
Putative acyl-activating enzyme 19 isoform X1.
  
 0.455
LOC104227144
Chitinase 2-like; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.450
LOC104228097
Putative ripening-related protein 2.
  
     0.440
LOC104246087
Chitinase 2-like; Belongs to the glycosyl hydrolase 18 family.
  
     0.440
LOC104228102
Putative ripening-related protein 2.
  
     0.436
LOC104234714
Uncharacterized protein LOC104234714 isoform X1.
  
 
   0.436
LOC104232105
Uncharacterized protein LOC104232105.
  
 
   0.427
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.