STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104212469Putative proline-rich receptor-like protein kinase PERK6. (590 aa)    
Predicted Functional Partners:
LOC104247131
CDPK-related kinase 5-like.
  
  0.454
LOC104245140
Serine/threonine-protein kinase SAPK10-like; Belongs to the protein kinase superfamily.
  
 
  0.423
LOC104226670
Serine/threonine-protein kinase SRK2I-like; Belongs to the protein kinase superfamily.
  
 
  0.420
LOC104238867
Calcium-dependent protein kinase 24 isoform X1.
  
 0.414
LOC104234658
Serine/threonine-protein kinase SRK2E-like; Belongs to the protein kinase superfamily.
  
 
  0.413
LOC104224203
Serine/threonine-protein kinase SRK2E; Belongs to the protein kinase superfamily.
  
 
  0.411
LOC104225891
Serine/threonine-protein kinase SRK2A; Belongs to the protein kinase superfamily.
  
 
  0.411
LOC104218843
Serine/threonine-protein kinase GRIK1-like; Belongs to the protein kinase superfamily.
  
 
   0.408
LOC104216115
Calcium-dependent protein kinase 28-like.
  
  0.404
LOC104249797
Serine/threonine-protein kinase SRK2A-like; Belongs to the protein kinase superfamily.
  
 
  0.401
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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