STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104214771WD repeat-containing protein 11 isoform X1. (920 aa)    
Predicted Functional Partners:
LOC104213949
WD repeat-containing protein 11-like.
 
     0.931
LOC104241651
Protein FAM91A1 isoform X1.
     
 0.771
LOC104228690
N-alpha-acetyltransferase 40 isoform X1.
    
   0.704
LOC104248457
Trafficking protein particle complex subunit 11 isoform X1.
   
    0.673
LOC104216049
Uncharacterized protein LOC104216049.
  
    0.528
LOC104227948
Uncharacterized protein LOC104227948.
  
    0.527
LOC104246515
Homocysteine S-methyltransferase 2-like isoform X1.
   
 
  0.508
LOC104245742
Homocysteine S-methyltransferase 1.
   
 
  0.508
LOC104249776
Homocysteine S-methyltransferase 2-like.
   
 
  0.508
LOC104246591
Vacuolar protein sorting-associated protein 20 homolog 2-like.
    
 
 0.506
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.