STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104216892Cysteine-rich repeat secretory protein 60. (283 aa)    
Predicted Functional Partners:
LOC104240120
UPF0481 protein At3g47200 isoform X1.
  
     0.518
LOC104231003
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.502
LOC104227989
Uncharacterized protein LOC104227989.
  
     0.500
LOC104221640
Fasciclin-like arabinogalactan protein 1.
  
     0.489
LOC104223861
Gibberellin-regulated protein 14-like.
  
     0.482
LOC104240772
Uncharacterized protein LOC104240772.
  
     0.467
LOC104249926
Transcription factor bHLH148-like.
  
     0.466
LOC104229218
Uncharacterized GPI-anchored protein At4g28100-like.
  
     0.465
LOC104235351
Uncharacterized protein LOC104235351.
  
     0.464
LOC104222142
Uncharacterized protein LOC104222142.
  
     0.463
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.