STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104215715Legumin B-like. (496 aa)    
Predicted Functional Partners:
LOC104243630
ATP-dependent DNA helicase Q-like SIM isoform X1.
  
 0.824
LOC104248626
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.824
LOC104218972
DNA repair protein XRCC3 homolog.
    
 0.762
LOC104222905
DNA repair protein XRCC2 homolog isoform X1.
   
 0.730
LOC104230043
DNA repair protein RAD51 homolog 3 isoform X1.
   
 0.697
LOC104235297
Meiotic recombination protein DMC1 homolog; Belongs to the RecA family.
   
 0.697
LOC104228058
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.691
LOC104232367
Mitogen-activated protein kinase kinase kinase YODA-like; Belongs to the protein kinase superfamily.
   
 0.675
LOC104246259
Crossover junction endonuclease MUS81.
   
 0.668
LOC104219135
Exonuclease 1 isoform X1.
  
 0.636
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.