STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104216915Uncharacterized protein LOC104216915. (344 aa)    
Predicted Functional Partners:
LOC104218849
Uncharacterized protein LOC104218849.
  
     0.477
LOC104233372
Transcription initiation factor TFIID subunit 8-like.
  
     0.456
LOC104234385
Uncharacterized protein LOC104234385.
  
     0.456
LOC104242973
Uncharacterized protein LOC104242973.
  
     0.450
LOC104220433
Uncharacterized protein LOC104220433.
  
     0.446
LOC104241517
Uncharacterized protein LOC104241517.
  
     0.443
LOC104220293
Uncharacterized protein LOC104220293 isoform X1.
  
     0.441
LOC104212419
Uncharacterized protein LOC104212419.
  
     0.440
LOC104235494
Uncharacterized protein LOC104235494.
  
     0.430
LOC104240371
Uncharacterized protein LOC104240371 isoform X1.
  
     0.428
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.