STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104217366Nucleolar protein 10. (697 aa)    
Predicted Functional Partners:
LOC104213098
Ribosome biogenesis protein BMS1 homolog.
   
 
 0.999
LOC104224323
Nucleolar complex protein 3 homolog.
   
    0.999
LOC104239525
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
    0.999
LOC104215636
Neuroguidin.
   
 
 0.998
LOC104226731
Probable U3 small nucleolar RNA-associated protein 7.
   
 
 0.998
LOC104226778
Nucleolar protein 6 isoform X1.
   
 
 0.998
LOC104230197
U3 small nucleolar RNA-associated protein 21 homolog.
   
 
 0.998
LOC104243190
Uncharacterized protein.
   
 
 0.998
LOC104245165
Bystin isoform X1.
   
 
 0.998
LOC104218491
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.997
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.