STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104217465Homeobox-leucine zipper protein HDG2-like. (757 aa)    
Predicted Functional Partners:
LOC104241467
Protein COBRA-like.
  
     0.507
LOC104230215
Uncharacterized protein LOC104230215.
  
     0.503
LOC104215084
COBRA-like protein; Belongs to the COBRA family.
  
     0.500
LOC104232496
COBRA-like protein; Belongs to the COBRA family.
  
     0.500
LOC104241343
Beta-galactosidase-like.
  
     0.497
LOC104217331
Uncharacterized protein LOC104217331.
  
 
   0.496
LOC104226511
COBRA-like protein; Belongs to the COBRA family.
  
     0.492
LOC104229771
COBRA-like protein; Belongs to the COBRA family.
  
     0.492
LOC104231582
COBRA-like protein; Belongs to the COBRA family.
  
     0.492
LOC104210012
GDSL esterase/lipase EXL3-like isoform X1.
  
     0.484
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.