STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104219162Uncharacterized protein LOC104219162. (298 aa)    
Predicted Functional Partners:
LOC104232850
Uncharacterized protein LOC104232850.
  
     0.521
LOC104221257
Uncharacterized protein LOC104221257.
  
     0.516
LOC104218513
Uncharacterized protein LOC104218513.
  
     0.511
LOC104217815
Uncharacterized protein LOC104217815.
  
     0.511
LOC104245267
Uncharacterized protein LOC104245267.
  
     0.511
LOC104233220
Uncharacterized protein LOC104233220.
  
     0.509
LOC104239381
Uncharacterized protein LOC104239381.
  
     0.509
LOC104219773
Uncharacterized protein LOC104219773.
  
     0.508
LOC104233401
Uncharacterized protein LOC104233401.
  
     0.508
LOC104240077
Uncharacterized protein LOC104240077.
  
     0.508
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.