STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10421917026S protease regulatory subunit 10B homolog A-like isoform X1; Belongs to the AAA ATPase family. (454 aa)    
Predicted Functional Partners:
LOC104230588
26S proteasome non-ATPase regulatory subunit 6 homolog.
   
 0.972
LOC104217820
26S proteasome non-ATPase regulatory subunit 7 homolog A.
  
 0.963
LOC104220705
26S proteasome regulatory subunit 4 homolog A; Belongs to the AAA ATPase family.
  
0.952
LOC104247743
26S proteasome regulatory subunit 4 homolog A-like; Belongs to the AAA ATPase family.
  
0.952
LOC104244249
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
  
 0.951
LOC104243974
26S proteasome regulatory subunit RPN13 isoform X1.
   
 0.947
LOC104226919
26S proteasome non-ATPase regulatory subunit 14 homolog.
  
 0.943
LOC104231763
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
  
 0.943
LOC104230175
26S protease regulatory subunit 6A homolog; Belongs to the AAA ATPase family.
  
0.939
LOC104231214
26S protease regulatory subunit 6A homolog; Belongs to the AAA ATPase family.
  
0.939
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: low (18%) [HD]