STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104216949Uncharacterized protein LOC104216949. (291 aa)    
Predicted Functional Partners:
LOC104238880
Uncharacterized protein LOC104238880.
  
 
   0.500
LOC104249386
Uncharacterized protein LOC104249386 isoform X1.
  
 
   0.497
LOC104235510
Uncharacterized protein LOC104235510.
  
     0.471
LOC104243208
Uncharacterized protein LOC104243208.
  
     0.468
LOC104249428
Uncharacterized protein LOC104249428.
  
     0.468
LOC104242198
Uncharacterized protein LOC104242198.
  
     0.439
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.