STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104217175Mavicyanin-like. (182 aa)    
Predicted Functional Partners:
LOC104216646
Uncharacterized protein LOC104216646 isoform X1.
  
     0.513
LOC104213291
Uncharacterized protein LOC104213291.
  
 
  0.510
LOC104229718
K(+) efflux antiporter 4-like.
  
 
   0.499
LOC104232140
Uncharacterized protein LOC104232140.
  
  0.496
LOC104217525
Homeobox-leucine zipper protein ATHB-15-like.
  
     0.491
LOC104211782
Zinc finger protein ZAT8-like.
  
 
  0.483
LOC104232675
Uncharacterized protein LOC104232675.
  
     0.475
LOC104241375
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
  0.474
LOC104213138
psbQ-like protein 1, chloroplastic isoform X1.
    
 
 0.472
LOC104245422
Protein IQ-DOMAIN 1 isoform X1.
  
     0.471
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.