STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104215180PH-interacting protein. (1699 aa)    
Predicted Functional Partners:
LOC104241634
Anaphase-promoting complex subunit 4 isoform X1.
  
 
 0.785
LOC104233104
Mitotic spindle checkpoint protein MAD2.
   
 0.772
LOC104249289
DNA damage-binding protein 1 isoform X1.
    
 
 0.771
LOC104218638
Transcription initiation factor TFIID subunit 9.
    
 0.761
LOC104234090
Transcription initiation factor TFIID subunit 1 isoform X1.
   
 0.760
LOC104235781
Transcription initiation factor TFIID subunit 2 isoform X1.
   
 0.749
LOC104246904
Anaphase-promoting complex subunit 6.
   
 0.745
LOC104244024
Testis-expressed sequence 10 protein-like.
   
 0.727
LOC104241198
Transcription initiation factor TFIID subunit 7 isoform X1.
    
 0.712
LOC104235380
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
   
 0.711
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.