STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104217378Vacuolar protein sorting-associated protein 51 homolog. (133 aa)    
Predicted Functional Partners:
LOC104227836
Vacuolar protein sorting-associated protein 53 A.
    
 0.983
LOC104215544
Vacuolar protein sorting-associated protein 52 A-like isoform X1.
   
 0.931
LOC104228320
Vacuolar protein sorting-associated protein 52 A-like isoform X1.
   
 0.931
LOC104249455
Vacuolar protein sorting-associated protein 54, chloroplastic-like isoform X1.
   
 0.883
LOC104245953
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 54, chloroplastic-like.
   
 0.883
LOC104229862
Uncharacterized protein LOC104229861.
    
 
 0.862
LOC104250056
Coiled-coil domain-containing protein 132.
    
 
 0.862
LOC104227168
WD repeat-containing protein DWA2.
   
 
 0.850
LOC104219971
Conserved oligomeric Golgi complex subunit 2.
   
 
 0.830
LOC104232426
Conserved oligomeric Golgi complex subunit 5 isoform X1.
   
 
 0.830
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: medium (48%) [HD]