STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104218654Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (140 aa)    
Predicted Functional Partners:
LOC104238421
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A-like.
   
 0.957
LOC104246572
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B.
   
 0.955
LOC104248364
malonyl-CoA-acyl carrier protein transacylase, mitochondrial.
  
 0.955
LOC104216533
Putative acyl-activating enzyme 19 isoform X1.
  
 0.954
ndhJ
NAD(P)H-quinone oxidoreductase subunit J, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
   
 0.953
LOC104226885
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.944
LOC104219756
NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial.
   
 0.934
LOC104234990
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like.
   
 0.930
LOC104215434
Putative membrane-bound O-acyltransferase C24H6.01c isoform X1; Belongs to the membrane-bound acyltransferase family.
  
 
 0.912
ndhH
NAD(P)H-quinone oxidoreductase subunit H, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
   
 0.912
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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