STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104218725Kirola-like. (146 aa)    
Predicted Functional Partners:
LOC104249924
Putative F-box protein At2g02030.
  
     0.514
LOC104239022
Transcription factor bHLH120-like.
  
     0.485
LOC104249274
F-box/FBD/LRR-repeat protein At1g13570.
  
     0.473
LOC104247184
Transcription factor bHLH118-like.
  
     0.463
LOC104216405
Serine/threonine-protein phosphatase 7 long form homolog.
  
     0.461
LOC104233405
F-box/kelch-repeat protein At3g23880-like isoform X1.
  
     0.460
LOC104245872
F-box/kelch-repeat protein At1g57790-like.
  
     0.447
LOC104231102
Uncharacterized protein LOC104231102.
  
     0.443
LOC104245550
F-box protein CPR30-like.
  
     0.440
LOC104229268
Vinorine synthase-like.
  
     0.438
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.