STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104220281Uncharacterized protein LOC104220281 isoform X1. (315 aa)    
Predicted Functional Partners:
LOC104238247
Protein transport protein Sec31A-like.
    
 0.792
LOC104212063
Protein transport protein SEC13-like; Belongs to the WD repeat SEC13 family.
    
 0.710
LOC104216238
Protein SEC13 homolog; Belongs to the WD repeat SEC13 family.
    
 0.710
LOC104227653
Protein transport protein Sec24-like At3g07100.
     
 0.614
LOC104232400
Protein transport protein SEC24.
     
 0.614
LOC104238491
Protein transport protein Sec24-like At3g07100.
     
 0.614
LOC104218291
Protein transport protein Sec24-like At4g32640.
   
 
 0.598
LOC104236608
Protein transport protein Sec24-like At4g32640 isoform X1.
   
 
 0.598
LOC104212575
Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 
  0.570
LOC104216822
Membrin-11-like.
   
 
  0.570
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.