STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104219381Uncharacterized protein LOC104219381. (157 aa)    
Predicted Functional Partners:
LOC104232513
Uncharacterized protein LOC104232513.
  
    0.533
LOC104211201
Uncharacterized protein LOC104211201.
  
     0.507
LOC104233280
Uncharacterized protein LOC104233280.
  
     0.496
LOC104220170
Uncharacterized protein LOC104220170.
  
     0.490
LOC104220990
Transcription factor bHLH13-like.
  
     0.490
LOC104211774
Uncharacterized protein LOC104211774.
  
     0.480
LOC104223413
Uncharacterized protein LOC104223413.
  
     0.476
LOC104218395
Uncharacterized protein LOC104218395.
  
     0.474
LOC104214240
Transcription factor bHLH61-like.
  
     0.467
LOC104228588
Stress response protein NST1-like.
  
     0.466
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.